STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHSRPKH-type splicing regulatory protein. (667 aa)    
Predicted Functional Partners:
PUF60
Poly(U) binding splicing factor 60.
   
 
 0.764
PARN
Poly(A)-specific ribonuclease.
   
 0.749
DROSHA
Drosha ribonuclease III.
   
 
 0.703
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family.
   
 
 0.698
G3U4N4_LOXAF
RRM domain-containing protein.
   
 
 0.666
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.659
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.614
PUM2
Pumilio RNA binding family member 2.
   
 
 0.599
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
   
 
 0.593
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.