STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN7UBX domain-containing protein 7. (490 aa)    
Predicted Functional Partners:
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.999
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.999
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.999
G3TGV5_LOXAF
Uncharacterized protein.
   
 0.999
G3THD6_LOXAF
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.999
PSMB2
Proteasome subunit beta.
    
  0.999
FAAP100
FA core complex associated protein 100.
    
 0.999
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.996
UBXN1
UBX domain protein 1.
   
 0.996
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.