STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBL1Neuroblastoma suppressor of tumorigenicity 1. (180 aa)    
Predicted Functional Partners:
GDF5
Growth differentiation factor 5.
     
 0.903
GDF6
Growth differentiation factor 6.
     
 0.901
BMP7
Bone morphogenetic protein 7.
     
  0.900
BMP8A
TGF_BETA_2 domain-containing protein.
     
  0.900
BMP4
Bone morphogenetic protein 4.
     
 0.900
BMP2
Bone morphogenetic protein 2.
     
 0.900
BMP6
Bone morphogenetic protein 6.
     
  0.900
BMP5
Bone morphogenetic protein 5.
     
  0.900
CCL22
C-C motif chemokine.
      
 0.529
SOSTDC1
Sclerostin domain containing 1.
      
 0.522
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.