STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (809 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.647
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.582
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.567
SYT10
Synaptotagmin 10.
      
 0.557
TDRD5
Tudor domain containing 5.
      
 0.557
GRPEL2
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
 
    
 0.545
CNTN6
Contactin 6.
      
 0.469
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.453
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.418
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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