STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UHJ8_LOXAFETS domain-containing protein. (281 aa)    
Predicted Functional Partners:
CSF3R
Colony stimulating factor 3 receptor.
   
 0.659
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 
 0.615
GATA2
GATA binding protein 2.
    
 0.594
MYB
MYB proto-oncogene, transcription factor.
     
 0.590
IRF8
Interferon regulatory factor 8.
   
 
 0.540
GATA3
GATA binding protein 3.
    
 0.507
PTPRC
Protein tyrosine phosphatase receptor type C.
   
  
 0.504
IRF1
Interferon regulatory factor.
   
 
 0.497
GATA1
GATA binding protein 1.
    
 0.496
EP300
E1A binding protein p300.
    
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.