STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100664409Ig-like domain-containing protein; Belongs to the MHC class II family. (255 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.964
G3SSP8_LOXAF
Ig-like domain-containing protein.
   
0.880
HLA-DOB
Major histocompatibility complex, class II, DO beta.
   
0.880
LOC100665293
Ig-like domain-containing protein.
   
0.880
G3SY92_LOXAF
Ig-like domain-containing protein.
   
0.880
G3TN16_LOXAF
Ig-like domain-containing protein.
   
0.880
G3TW36_LOXAF
Ig-like domain-containing protein.
   
0.880
HLA-DPB1
Major histocompatibility complex, class II, DP beta 1.
   
0.880
HLA-DMA
Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family.
  
0.854
G3SUW7_LOXAF
Ig-like domain-containing protein.
   
0.849
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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