STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERDCation channel sperm associated auxiliary subunit delta. (746 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.959
CATSPER2
Cation channel sperm associated 2.
  
 
 0.939
G3SUK6_LOXAF
Uncharacterized protein.
   
 0.937
CATSPER3
Cation channel sperm associated 3.
    
 0.930
G3UIJ0_LOXAF
Ion_trans domain-containing protein.
    
 0.907
CATSPER4
Cation channel sperm associated 4.
    
 0.893
CATSPERE
Catsper channel auxiliary subunit epsilon.
  
 
0.834
TMEM238
Uncharacterized protein.
   
 0.808
CATSPERZ
Catsper channel auxiliary subunit zeta.
    
 0.779
EFCAB9
EF-hand calcium binding domain 9.
    
 0.748
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.