STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UIJ0_LOXAFIon_trans domain-containing protein. (665 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.973
G3SUK6_LOXAF
Uncharacterized protein.
    
 0.968
CATSPER2
Cation channel sperm associated 2.
  
0.963
CATSPER4
Cation channel sperm associated 4.
  
 
0.946
CATSPER3
Cation channel sperm associated 3.
  
0.944
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
    
 0.907
EFCAB9
EF-hand calcium binding domain 9.
    
 0.853
TMEM238
Uncharacterized protein.
    
 0.788
CATSPERZ
Catsper channel auxiliary subunit zeta.
    
 0.780
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.770
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.