STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC22Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (263 aa)    
Predicted Functional Partners:
FAM163B
Family with sequence similarity 163 member B.
   
  
 0.667
ZC2HC1B
Zinc finger C2HC-type containing 1B.
      
 0.642
SEC22C
SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.
   
 
 0.534
ZDHHC4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.528
ZDHHC23
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.522
ZNF106
Zinc finger protein 106.
    
 0.489
ZDHHC6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.462
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
   
  
 0.437
WRN
WRN RecQ like helicase.
    
 0.433
GOLGA7B
Golgin A7 family member B.
   
 0.424
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.