STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4F1E4F transcription factor 1. (783 aa)    
Predicted Functional Partners:
SPRTN
SprT-like N-terminal domain.
    
 
 0.752
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 
 0.635
ASL
Uncharacterized protein.
      
 0.585
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
  0.575
WDR24
WD repeat domain 24.
   
 
  0.574
RPA2
Replication protein A2.
    
 0.560
PERP
P53 apoptosis effector related to PMP22.
      
 0.557
HCFC1R1
Host cell factor C1 regulator 1.
      
 0.533
BRAT1
BRCA1 associated ATM activator 1.
   
    0.531
LRRC14
Leucine rich repeat containing 14.
   
    0.485
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.