STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAVER1Uncharacterized protein. (743 aa)    
Predicted Functional Partners:
VCL
Vinculin.
    
 
 0.922
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
  
 0.709
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.594
G3U4N4_LOXAF
RRM domain-containing protein.
   
 0.566
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.538
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.515
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.515
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
   0.515
NDOR1
NADPH dependent diflavin oxidoreductase 1.
   
    0.506
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
 
 0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.