STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP1BUncharacterized protein. (164 aa)    
Predicted Functional Partners:
CHMP2A
Charged multivesicular body protein 2A.
   
0.991
VTA1
Vesicle trafficking 1.
    
 0.990
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.982
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.978
CHMP2B
Charged multivesicular body protein 2B.
   
 0.958
CHMP1A
Charged multivesicular body protein 1A.
  
  
 
0.902
CHMP5
Charged multivesicular body protein 5.
   
 
 0.894
IST1
IST1 factor associated with ESCRT-III.
    
 
 0.772
G3U0Z3_LOXAF
Uncharacterized protein.
    
 
 0.772
CHMP4C
Charged multivesicular body protein 4C.
    
 0.742
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.