STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3ULL0_LOXAFUncharacterized protein. (331 aa)    
Predicted Functional Partners:
COL21A1
VWFA domain-containing protein.
 
      0.900
COL22A1
Uncharacterized protein.
  
 
0.576
C1QTNF2
C1q and TNF related 2.
  
  
  0.569
MSR1
Macrophage scavenger receptor 1.
  
 
  0.525
COLEC10
Collectin subfamily member 10.
  
 
  0.524
COLEC11
Collectin subfamily member 11.
  
 
  0.493
SCARA3
Scavenger receptor class A member 3.
  
     0.481
GLDN
Gliomedin.
  
   
 0.475
COL8A1
Collagen type VIII alpha 1 chain.
  
0.470
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.468
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.