STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WASHC2CCAP-ZIP_m domain-containing protein. (1317 aa)    
Predicted Functional Partners:
WASHC1
WASH complex subunit 1.
    
 
 0.900
WASHC5
WASH complex subunit 5.
   
 
 0.863
WASHC3
WASH complex subunit 3.
    
 
 0.855
WASHC4
WASH complex subunit 4.
   
 
 0.841
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.799
SLF1
ANK_REP_REGION domain-containing protein.
    
 
 0.734
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.598
G3UKG6_LOXAF
Metallophos_2 domain-containing protein.
    
 
 0.598
SNX27
Sorting nexin 27.
    
 
 0.597
ARID5A
AT-rich interaction domain 5A.
   
  
 0.584
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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