STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NICN1Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
   
 0.757
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 0.749
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.745
TTLL1
Tubulin tyrosine ligase like 1.
   
 0.735
AMT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 
  
 0.689
ANKRD52
Ankyrin repeat domain 52.
      
 0.567
TTL
Tubulin tyrosine ligase.
   
 0.557
TBC1D19
TBC1 domain family member 19.
    
   0.513
KIAA1841
KIAA1841.
    
   0.513
C11orf49
Chromosome 11 open reading frame 49.
    
   0.507
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.