Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | FMR1 | ENSLAFP00000010792 | ENSLAFP00000026322 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Fragile X mental retardation 1. | 0.790 |
| AGO2 | FXR1 | ENSLAFP00000010792 | ENSLAFP00000029244 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 1. | 0.790 |
| AGO2 | FXR2 | ENSLAFP00000010792 | ENSLAFP00000000937 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 2. | 0.667 |
| ATXN2 | FMR1 | ENSLAFP00000006248 | ENSLAFP00000026322 | Ataxin 2. | Fragile X mental retardation 1. | 0.575 |
| ATXN2 | FXR1 | ENSLAFP00000006248 | ENSLAFP00000029244 | Ataxin 2. | FMR1 autosomal homolog 1. | 0.677 |
| ATXN2 | G3BP1 | ENSLAFP00000006248 | ENSLAFP00000007697 | Ataxin 2. | G3BP stress granule assembly factor 1. | 0.682 |
| CPEB3 | CPEB4 | ENSLAFP00000015691 | ENSLAFP00000013456 | Cytoplasmic polyadenylation element binding protein 3. | Cytoplasmic polyadenylation element binding protein 4. | 0.911 |
| CPEB3 | FXR1 | ENSLAFP00000015691 | ENSLAFP00000029244 | Cytoplasmic polyadenylation element binding protein 3. | FMR1 autosomal homolog 1. | 0.754 |
| CPEB3 | FXR2 | ENSLAFP00000015691 | ENSLAFP00000000937 | Cytoplasmic polyadenylation element binding protein 3. | FMR1 autosomal homolog 2. | 0.727 |
| CPEB4 | CPEB3 | ENSLAFP00000013456 | ENSLAFP00000015691 | Cytoplasmic polyadenylation element binding protein 4. | Cytoplasmic polyadenylation element binding protein 3. | 0.911 |
| CPEB4 | FXR1 | ENSLAFP00000013456 | ENSLAFP00000029244 | Cytoplasmic polyadenylation element binding protein 4. | FMR1 autosomal homolog 1. | 0.755 |
| CPEB4 | FXR2 | ENSLAFP00000013456 | ENSLAFP00000000937 | Cytoplasmic polyadenylation element binding protein 4. | FMR1 autosomal homolog 2. | 0.592 |
| CYFIP1 | CYFIP2 | ENSLAFP00000007450 | ENSLAFP00000002378 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.713 |
| CYFIP1 | FMR1 | ENSLAFP00000007450 | ENSLAFP00000026322 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Fragile X mental retardation 1. | 0.857 |
| CYFIP1 | FXR1 | ENSLAFP00000007450 | ENSLAFP00000029244 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 1. | 0.796 |
| CYFIP1 | FXR2 | ENSLAFP00000007450 | ENSLAFP00000000937 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 2. | 0.796 |
| CYFIP2 | CYFIP1 | ENSLAFP00000002378 | ENSLAFP00000007450 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | 0.713 |
| CYFIP2 | FMR1 | ENSLAFP00000002378 | ENSLAFP00000026322 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Fragile X mental retardation 1. | 0.807 |
| CYFIP2 | FXR1 | ENSLAFP00000002378 | ENSLAFP00000029244 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 1. | 0.984 |
| CYFIP2 | FXR2 | ENSLAFP00000002378 | ENSLAFP00000000937 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | FMR1 autosomal homolog 2. | 0.980 |
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