STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS6KA5Ribosomal protein S6 kinase. (730 aa)    
Predicted Functional Partners:
RINT1
RAD50 interactor 1.
    
 0.709
STX18
Syntaxin 18.
   
 0.683
USE1
Unconventional SNARE in the ER 1.
    
 0.671
CREB1
cAMP responsive element binding protein 1.
   
 0.652
MAPK14
Mitogen-activated protein kinase.
   
0.632
ZW10
Zw10 kinetochore protein.
    
 0.632
G3SLR0_LOXAF
Uncharacterized protein.
   
 0.574
ATF1
Uncharacterized protein.
   
 0.574
MSL3
MSL complex subunit 3.
    
 
 0.546
SEC22A
SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.
   
 0.528
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.