STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAG6Sperm associated antigen 6. (509 aa)    
Predicted Functional Partners:
SPAG17
Sperm associated antigen 17.
    
 
 0.789
KPNB1
Karyopherin subunit beta 1.
   
 0.757
G3T6M2_LOXAF
Uncharacterized protein.
      
 0.720
MEIG1
Meiosis/spermiogenesis associated 1.
      
 0.648
YARS1
Tyrosine--tRNA ligase.
   
  
 0.630
CSE1L
Chromosome segregation 1 like.
   
 
 0.629
SPEF2
Sperm flagellar 2.
   
 0.625
GAS8
Growth arrest specific 8.
  
   
 0.614
NUP153
Nucleoporin 153.
   
 
 0.599
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.592
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.