STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UNK3_LOXAFIF rod domain-containing protein; Belongs to the intermediate filament family. (185 aa)    
Predicted Functional Partners:
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.874
BAG3
BCL2 associated athanogene 3.
    
 0.636
NBR1
NBR1 autophagy cargo receptor.
    
 0.520
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.507
TSC1
TSC complex subunit 1.
    
 0.503
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
    
 0.503
TRAP1
TNF receptor associated protein 1.
    
 0.503
HSP90AA1
HATPase_c domain-containing protein.
    
 0.503
G3ULS6_LOXAF
Uncharacterized protein.
    
 0.503
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.502
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.