STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_00165Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000515335_00164
Unannotated protein.
 
    0.942
GCA_000515335_00163
Unannotated protein.
  
    0.723
GCA_000515335_00161
Unannotated protein.
     
 0.666
GCA_000515335_00122
Unannotated protein.
  
   
 0.641
GCA_000515335_00166
Unannotated protein.
     
 0.631
GCA_000515335_03952
Unannotated protein.
    
 
 0.590
GCA_000515335_04361
Unannotated protein.
   
    0.586
GCA_000515335_02127
Unannotated protein.
  
     0.579
GCA_000515335_02714
Unannotated protein.
  
     0.575
GCA_000515335_03328
Unannotated protein.
    
 
 0.564
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.