STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_00601Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_000515335_00600
Unannotated protein.
 0.999
GCA_000515335_00599
Unannotated protein.
 
 
 0.993
GCA_000515335_02243
Unannotated protein.
 
 0.943
GCA_000515335_00511
Unannotated protein.
  
 
 0.803
GCA_000515335_03924
Unannotated protein.
    
 0.802
GCA_000515335_00617
Unannotated protein.
  
 
 0.793
GCA_000515335_00616
Unannotated protein.
  
 
 0.783
GCA_000515335_00253
Unannotated protein.
  
 
 0.782
GCA_000515335_03479
Unannotated protein.
    
 0.758
GCA_000515335_03567
Unannotated protein.
    
 0.758
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.