STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_00682Unannotated protein. (658 aa)    
Predicted Functional Partners:
GCA_000515335_00684
Unannotated protein.
 
 0.999
GCA_000515335_02700
Unannotated protein.
  
 0.974
GCA_000515335_03943
Unannotated protein.
   
 0.962
GCA_000515335_00680
Unannotated protein.
  
 0.957
GCA_000515335_03832
Unannotated protein.
 
 
 0.956
GCA_000515335_03782
Unannotated protein.
   
 0.946
GCA_000515335_01418
Unannotated protein.
   
 0.933
GCA_000515335_03786
Unannotated protein.
   
 0.926
GCA_000515335_03242
Unannotated protein.
    
 0.922
GCA_000515335_00785
Unannotated protein.
  
 0.921
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.