STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_00996Unannotated protein. (364 aa)    
Predicted Functional Partners:
GCA_000515335_00994
Unannotated protein.
    0.949
GCA_000515335_00993
Unannotated protein.
 
    0.895
GCA_000515335_01860
Unannotated protein.
  
    0.775
GCA_000515335_03631
Unannotated protein.
  
    0.775
GCA_000515335_01656
Unannotated protein.
  
    0.774
GCA_000515335_02747
Unannotated protein.
  
    0.774
GCA_000515335_03085
Unannotated protein.
  
    0.774
GCA_000515335_02147
Unannotated protein.
 
    0.773
GCA_000515335_04251
Unannotated protein.
  
    0.758
GCA_000515335_02146
Unannotated protein.
  
    0.745
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.