STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_01208Unannotated protein. (337 aa)    
Predicted Functional Partners:
GCA_000515335_01207
Unannotated protein.
 
 
 0.996
GCA_000515335_00242
Unannotated protein.
  
 
 0.942
GCA_000515335_01206
Unannotated protein.
  
  
 0.907
GCA_000515335_01203
Unannotated protein.
 
 
 0.895
GCA_000515335_01205
Unannotated protein.
 
  
 0.840
GCA_000515335_03296
Unannotated protein.
    
 
 0.837
GCA_000515335_01469
Unannotated protein.
 
 
 0.828
GCA_000515335_04353
Unannotated protein.
  
 
 0.815
GCA_000515335_01204
Unannotated protein.
 
 
 0.799
GCA_000515335_01209
Unannotated protein.
  
  
 0.726
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.