STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_01359Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000515335_01360
Unannotated protein.
       0.768
GCA_000515335_01361
Unannotated protein.
       0.768
GCA_000515335_01358
Unannotated protein.
       0.730
GCA_000515335_00884
Unannotated protein.
    
  0.692
GCA_000515335_01362
Unannotated protein.
       0.684
GCA_000515335_01366
Unannotated protein.
       0.677
GCA_000515335_01363
Unannotated protein.
  
    0.672
GCA_000515335_01364
Unannotated protein.
       0.670
GCA_000515335_01365
Unannotated protein.
       0.670
GCA_000515335_01367
Unannotated protein.
       0.670
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.