STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_01851Unannotated protein. (687 aa)    
Predicted Functional Partners:
GCA_000515335_00194
Unannotated protein.
 
 0.973
GCA_000515335_02455
Unannotated protein.
 
 0.972
GCA_000515335_00193
Unannotated protein.
  
  0.962
GCA_000515335_02456
Unannotated protein.
  
  0.962
GCA_000515335_02804
Unannotated protein.
  
  0.962
GCA_000515335_03412
Unannotated protein.
  
 0.962
GCA_000515335_01793
Unannotated protein.
 
 0.949
GCA_000515335_00823
Unannotated protein.
 
 0.948
GCA_000515335_02453
Unannotated protein.
 
 0.948
GCA_000515335_00314
Unannotated protein.
  
 0.916
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.