STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_03921Unannotated protein. (382 aa)    
Predicted Functional Partners:
GCA_000515335_02564
Unannotated protein.
 
 
    0.901
GCA_000515335_02246
Unannotated protein.
     
 0.869
GCA_000515335_01630
Unannotated protein.
   
 
 0.854
GCA_000515335_03920
Unannotated protein.
       0.709
GCA_000515335_01029
Unannotated protein.
   
 
 0.663
GCA_000515335_02506
Unannotated protein.
   
 
 0.663
GCA_000515335_03888
Unannotated protein.
   
 
 0.663
GCA_000515335_04347
Unannotated protein.
 
      0.616
GCA_000515335_02661
Unannotated protein.
 
 
    0.595
GCA_000515335_04373
Unannotated protein.
 
 
 0.587
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.