STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_03981Unannotated protein. (138 aa)    
Predicted Functional Partners:
GCA_000515335_00589
Unannotated protein.
  
 
 0.924
GCA_000515335_03090
Unannotated protein.
     
 0.658
GCA_000515335_03091
Unannotated protein.
     
 0.652
GCA_000515335_03089
Unannotated protein.
     
 0.649
GCA_000515335_03095
Unannotated protein.
     
 0.649
GCA_000515335_03542
Unannotated protein.
  
    0.570
GCA_000515335_01072
Unannotated protein.
  
     0.543
GCA_000515335_00496
Unannotated protein.
 
  
 0.528
GCA_000515335_03759
Unannotated protein.
     
 0.477
GCA_000515335_00460
Unannotated protein.
  
  
 0.466
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.