STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515335_04092Unannotated protein. (351 aa)    
Predicted Functional Partners:
GCA_000515335_04094
Unannotated protein.
 
 0.996
GCA_000515335_04093
Unannotated protein.
 
  
 0.994
GCA_000515335_00514
Unannotated protein.
 
 0.985
GCA_000515335_01221
Unannotated protein.
 0.976
GCA_000515335_01967
Unannotated protein.
 
 0.960
GCA_000515335_01220
Unannotated protein.
  
 
 0.936
GCA_000515335_04245
Unannotated protein.
  
 
 0.882
GCA_000515335_03479
Unannotated protein.
    
 0.771
GCA_000515335_03567
Unannotated protein.
    
 0.771
GCA_000515335_01793
Unannotated protein.
  
 
 0.747
Your Current Organism:
Cohnella panacarvi
NCBI taxonomy Id: 979226
Other names: C. panacarvi Gsoil 349, Cohnella panacarvi Gsoil 349, Cohnella panacarvi str. Gsoil 349, Cohnella panacarvi strain Gsoil 349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.