STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLVS1Clavesin 1. (354 aa)    
Predicted Functional Partners:
ANKRD27
Ankyrin repeat domain 27.
    
 0.516
UNKL
Unk like zinc finger.
      
 0.514
MPV17L
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.511
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.509
LGI1
Leucine rich glioma inactivated 1.
   
    0.504
AP1S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 
 0.499
AP1M2
Adaptor related protein complex 1 subunit mu 2; Belongs to the adaptor complexes medium subunit family.
   
 
 0.492
AP1M1
AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
     
 0.489
AKAP7
A-kinase anchoring protein 7.
      
 0.482
TBX10
T-box transcription factor 10.
   
  
 0.479
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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