STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZSarcoglycan zeta. (312 aa)    
Predicted Functional Partners:
XYLB
Xylulokinase.
      
 0.883
SGCE
Sarcoglycan epsilon.
   
 0.861
SNTG1
Syntrophin gamma 1.
   
 
 0.773
SNTG2
Syntrophin gamma 2.
   
 
 0.765
SNTB2
Syntrophin beta 2.
     
 0.746
DAG1
Dystroglycan 1.
    
 0.685
SGCG
Sarcoglycan gamma.
  
 
0.679
SNTB1
Syntrophin beta 1.
     
 0.661
AGMO
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
   
 
 0.658
SGCA
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
     
 0.657
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.