STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGP2SURP and G-patch domain containing 2. (1090 aa)    
Predicted Functional Partners:
RBM17
RNA binding motif protein 17.
   
 
 0.673
UBXN8
UBX domain protein 8.
   
  
 0.639
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.573
CNBP
CCHC-type zinc finger nucleic acid binding protein.
      
 0.564
FAM200B
Family with sequence similarity 200 member B.
   
  
 0.532
ENSECAP00000043199
G-patch domain-containing protein.
   
 
 0.521
DHX15
DEAH-box helicase 15.
   
 0.495
DEF8
Differentially expressed in FDCP 8 homolog.
   
  
 0.493
DHX32
DEAH-box helicase 32 (putative).
   
 0.489
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
   
  
 0.486
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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