STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3H16orf78Chromosome 3 C16orf78 homolog. (263 aa)    
Predicted Functional Partners:
EFCAB10
EF-hand calcium binding domain 10.
   
  
 0.534
STPG2
Sperm tail PG-rich repeat containing 2.
      
 0.524
ENSECAP00000024250
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.482
PRODH2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.481
CFAP206
Cilia and flagella associated protein 206.
      
 0.478
DENND3
DENN domain containing 3.
      
 0.475
TAFA1
TAFA chemokine like family member 1.
      
 0.472
RINT1
RAD50 interactor 1.
      
 0.471
MAN1C1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.440
MRPS30
Mitochondrial ribosomal protein S30.
      
 0.438
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.