STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C13H16orf71Chromosome 13 C16orf71 homolog. (524 aa)    
Predicted Functional Partners:
ZSWIM4
Zinc finger SWIM-type containing 4.
   
  
 0.499
TCTEX1D4
Tctex1 domain containing 4.
   
  
 0.474
KIAA1671
KIAA1671.
  
     0.471
LIMS2
LIM zinc finger domain containing 2.
      
 0.471
MLIP
Muscular LMNA interacting protein.
  
     0.467
ARHGAP1
Rho GTPase activating protein 1.
   
  
 0.449
LRRC56
Leucine rich repeat containing 56.
   
  
 0.440
BICDL2
BICD family like cargo adaptor 2.
      
 0.428
ZNFX1
Zinc finger NFX1-type containing 1.
      
 0.422
CLUL1
Clusterin; Belongs to the clusterin family.
  
     0.421
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.