STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUNE1Prune exopolyphosphatase 1. (453 aa)    
Predicted Functional Partners:
HDDC3
HD domain containing 3.
   
 
  0.900
APRT
Adenine phosphoribosyltransferase.
     
 0.793
IP6K1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
   
  
 0.719
BNIPL
BCL2 interacting protein like.
 
    
 0.667
GSK3A
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.557
CDKL5
Cyclin dependent kinase like 5.
      
 0.553
BNIP2
BCL2 interacting protein 2.
 
 
  
 0.498
KIF1A
Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.478
NDE1
NudE neurodevelopment protein 1.
      
 0.470
CENPJ
Centromere protein J.
      
 0.469
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.