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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN7L3BAtaxin 7 like 3B. (97 aa)    
Predicted Functional Partners:
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...]
    
 0.876
ODF3L1
Outer dense fiber of sperm tails 3 like 1.
   
  
 0.865
CGGBP1
CGG triplet repeat binding protein 1.
   
 0.776
URB1
URB1 ribosome biogenesis 1 homolog (S. cerevisiae).
      
 0.744
RAPGEF1
Rap guanine nucleotide exchange factor 1.
   
  
 0.693
CLN8
CLN8 transmembrane ER and ERGIC protein.
      
 0.682
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
      
 0.672
TCERG1
Transcription elongation regulator 1.
      
 0.639
CISD3
CDGSH iron sulfur domain 3.
   
  
 0.619
BICD2
BICD cargo adaptor 2.
   
  
 0.564
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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