STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM3Zinc finger MYM-type containing 3. (1373 aa)    
Predicted Functional Partners:
ZNF280D
Zinc finger protein 280D.
   
 0.811
ANKRD31
Ankyrin repeat domain 31.
   
 0.735
NIPBL
Nipped-B protein.
   
 0.722
REC114
REC114 meiotic recombination protein.
    
 
 0.702
SALL2
Spalt like transcription factor 2.
   
  
 0.676
LENG1
Leukocyte receptor cluster member 1.
   
 0.667
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
    
 0.667
CHAF1A
Chromatin assembly factor 1 subunit A.
   
 
 0.656
RFX8
RFX family member 8, lacking RFX DNA binding domain.
      
 0.651
TNFRSF4
TNF receptor superfamily member 4.
      
 0.627
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.