Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM60Transmembrane protein 60-like protein. (133 aa)    
Predicted Functional Partners:
TMEM120A
Transmembrane protein 120A.
      
 0.596
TMEM50A
Transmembrane protein 50A.
      
 0.584
TMEM217
Uncharacterized protein.
      
 0.510
TMEM120B
Transmembrane protein 120B.
      
 0.509
LARP4B
La ribonucleoprotein domain family member 4B.
      
 0.465
PPIG
Peptidylprolyl isomerase G.
      
 0.460
FAM229B
Family with sequence similarity 229 member B.
      
 0.458
LOC100073135
Golgi apparatus membrane protein TVP23 homolog.
   
  
 0.446
CDRT4
CMT1A duplicated region transcript 4.
   
  
 0.446
CASC3
CASC3 exon junction complex subunit.
      
 0.435
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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