STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF19TNF receptor superfamily member 19. (420 aa)    
Predicted Functional Partners:
ISM1
Isthmin 1.
   
  
 0.635
TNFRSF10B
Uncharacterized protein.
      
 0.621
BCL7B
BAF chromatin remodeling complex subunit BCL7B.
      
 0.589
TNFRSF21
TNF receptor superfamily member 21.
   
  
 0.526
NKD1
NKD inhibitor of WNT signaling pathway 1.
   
  
 0.505
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 
 0.491
BCL2L13
BCL2 like 13.
      
 0.481
IQGAP3
IQ motif containing GTPase activating protein 3.
      
 0.477
ART3
NAD(P)(+)--arginine ADP-ribosyltransferase.
   
  
 0.474
RFX4
Regulatory factor X4.
      
 0.470
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.