Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DHX38DEAH-box helicase 38. (1239 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.995
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.991
SLU7
SLU7 homolog, splicing factor.
   
 0.990
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.990
WDR70
WD repeat domain 70.
   
 0.982
ALYREF
Aly/REF export factor.
   
 0.978
YJU2
YJU2 splicing factor homolog.
   
 0.975
PPIL4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
 0.967
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.965
GPKOW
G-patch domain and KOW motifs.
   
 0.961
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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