STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEURL2Neuralized E3 ubiquitin protein ligase 2. (285 aa)    
Predicted Functional Partners:
SPATA25
Spermatogenesis associated 25.
   
  
 0.838
ACSS3
Acyl-CoA synthetase short chain family member 3.
      
 0.757
ACOT8
Acyl-CoA thioesterase 8.
      
 0.717
CSAD
Cysteine sulfinic acid decarboxylase.
      
 0.709
CUL5
Cullin 5; Belongs to the cullin family.
     
 0.684
ALX4
ALX homeobox 4.
      
 0.683
ELOB
Elongin B.
     
 0.660
FRAS1
Fraser extracellular matrix complex subunit 1.
      
 0.657
CAND1
Cullin associated and neddylation dissociated 1.
     
 0.624
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.613
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.