STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6W627_HORSEUncharacterized protein. (206 aa)    
Predicted Functional Partners:
GABPB1
GA binding protein transcription factor subunit beta 1.
    
  0.800
TPD52L1
TPD52 like 1.
    
   0.797
GABPA
GA binding protein transcription factor subunit alpha.
    
   0.705
TPD52
Uncharacterized protein.
   
   0.682
LOC100058422
Uncharacterized protein.
   
   0.682
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
   
 
 0.599
ENSECAP00000039844
Uncharacterized protein.
    
   0.591
TPD52L3
Uncharacterized protein.
    
   0.591
ENSECAP00000051631
Uncharacterized protein.
    
   0.591
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
  
 0.557
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.