Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)    
Predicted Functional Partners:
PAX7
Paired box 7.
   
 
 0.958
EP300
E1A binding protein p300.
    
 
 0.945
TCF3
Transcription factor 3.
    
 0.942
MEF2C
Myocyte enhancer factor 2C.
    
 0.940
ID1
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.934
MEF2A
Myocyte-specific enhancer factor 2A isoform 1.
   
 0.930
FBXO32
F-box protein 32.
    
 
 0.920
TBP
TATA-box binding protein.
   
 0.918
F6UIV7_HORSE
Uncharacterized protein.
   
 0.896
TBPL1
TATA-box binding protein like 1.
    
 0.895
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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