STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS16ADAM metallopeptidase with thrombospondin type 1 motif 16. (1245 aa)    
Predicted Functional Partners:
VIT
Vitrin.
    
 0.809
IRX1
Iroquois homeobox 1.
   
  
 0.687
F7CCT3_HORSE
Uncharacterized protein.
      
 0.570
LOC100065830
Uncharacterized protein.
      
 0.570
ADAM30
ADAM metallopeptidase domain 30.
   
  
 0.569
LOC100061639
Uncharacterized protein.
      
 0.481
LOC100061672
Uncharacterized protein.
      
 0.481
MYOC
Myocilin.
   
  
 0.476
ERMAP
Erythroblast membrane associated protein.
      
 0.474
MMP17
Matrix metallopeptidase 17.
   
 
 0.468
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.