Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDSUB1WD repeat, sterile alpha motif and U-box domain containing 1. (475 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.807
UBOX5
U-box domain containing 5.
      
 0.775
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
 
    
 0.744
TTC37
Tetratricopeptide repeat domain 37.
   
 0.662
SKIV2L
Ski2 like RNA helicase.
    
 0.636
CDC73
Cell division cycle 73.
    
 0.635
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.607
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.575
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.575
WDR31
WD repeat domain 31.
  
 
 
 0.551
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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