Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM52Tripartite motif containing 52. (286 aa)    
Predicted Functional Partners:
LOC100066238
Olfactory receptor.
      
 0.860
LOC100062551
Olfactory receptor.
      
 0.860
F6PK19_HORSE
Olfactory receptor.
      
 0.860
F6QWE5_HORSE
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.860
LOC100146200
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.860
LOC100072566
Olfactory receptor.
      
 0.860
LOC100054881
Olfactory receptor.
      
 0.860
LOC100068914
Olfactory receptor.
   
  
 0.860
FAF2
Fas associated factor family member 2.
   
 
 0.798
PRR7
Proline rich 7, synaptic.
      
 0.778
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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