Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRTM3Leucine rich repeat transmembrane neuronal 3. (581 aa)    
Predicted Functional Partners:
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
    
   0.808
NKAIN2
Sodium/potassium transporting ATPase interacting 2.
   
  
 0.796
GDF6
Growth differentiation factor 6.
    
 0.749
NRXN2
Neurexin 2.
   
 0.718
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.698
FRMD5
FERM domain containing 5.
     
 0.694
ARHGAP26
Rho GTPase activating protein 26.
      
 0.689
NLGN3
Neuroligin 3.
   
 
 0.686
NRXN1
Neurexin 1.
   
 0.669
TENM1
Teneurin transmembrane protein 1.
   
 0.629
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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