STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100053832Keratin associated protein 3-1. (98 aa)    
Predicted Functional Partners:
KRT82
Keratin 82; Belongs to the intermediate filament family.
   
 
 0.836
KRT75
Keratin 75; Belongs to the intermediate filament family.
   
 
 0.778
KRTAP11-1
Keratin associated protein 11-1.
   
 0.709
LOC111770797
Uncharacterized protein.
   
 0.696
GUCA1C
Guanylate cyclase activator 1C.
    
 
 0.678
KRT15
Keratin 13; Belongs to the intermediate filament family.
   
 
 0.648
KRT27
Keratin 27; Belongs to the intermediate filament family.
   
 
 0.587
LOC100629761
4Fe-4S ferredoxin-type domain-containing protein.
   
 
 
0.581
LOC100629732
4Fe-4S ferredoxin-type domain-containing protein.
   
 
 
0.581
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 
 0.545
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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