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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF182Ring finger protein 182. (247 aa)    
Predicted Functional Partners:
TBC1D30
TBC1 domain family member 30.
      
 0.770
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.739
NRIP3
Nuclear receptor interacting protein 3.
   
  
 0.712
OCIAD2
OCIA domain containing 2.
   
  
 0.700
ARHGAP12
Rho GTPase activating protein 12.
     
 0.649
SYTL2
Synaptotagmin like 2.
    
 0.582
SLC39A6
Solute carrier family 39 member 6.
      
 0.581
RAB3C
RAB3C, member RAS oncogene family.
   
  
 0.575
RASD1
Ras related dexamethasone induced 1.
    
 0.530
RNF186
Ring finger protein 186.
      
 0.510
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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