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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNC1Potassium voltage-gated channel subfamily C member 1; Belongs to the potassium channel family. (585 aa)    
Predicted Functional Partners:
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.808
F7BVE8_HORSE
Ubiquitin-like domain-containing protein.
   
 0.719
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.719
ENSECAP00000029452
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.719
ENSECAP00000031221
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.719
ENSECAP00000033963
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.719
ENSECAP00000039190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.719
SCN4B
Sodium voltage-gated channel beta subunit 4.
   
 
 0.716
SCN8A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 
 0.707
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
   
 0.688
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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